File list (Check if you may need any files):
META-INF
........\MANIFEST.MF
gov
...\pnnl
...\....\dici
...\....\....\tasks
...\....\....\.....\ProcessSequenceTask.class
...\....\....\proteomics
...\....\....\util
STEPP_NormFactor_mean.txt
STEPP_NormFactor_std.txt
STEPP_SupportVectors.txt
STEPP_Weights.txt
gov\pnnl\dici\proteomics\PredictiveProteomicsApp$1.class
...\....\....\..........\PredictiveProteomicsApp$10.class
...\....\....\..........\PredictiveProteomicsApp$11.class
...\....\....\..........\PredictiveProteomicsApp$12.class
...\....\....\..........\PredictiveProteomicsApp$13.class
...\....\....\..........\PredictiveProteomicsApp$14.class
...\....\....\..........\PredictiveProteomicsApp$15.class
...\....\....\..........\PredictiveProteomicsApp$2.class
...\....\....\..........\PredictiveProteomicsApp$3.class
...\....\....\..........\PredictiveProteomicsApp$4.class
...\....\....\..........\PredictiveProteomicsApp$5.class
...\....\....\..........\PredictiveProteomicsApp$6.class
...\....\....\..........\PredictiveProteomicsApp$7.class
...\....\....\..........\PredictiveProteomicsApp$8.class
...\....\....\..........\PredictiveProteomicsApp$9.class
...\....\....\..........\PredictiveProteomicsApp.class
...\....\....\..........\PredictiveProteomicsConstants.class
...\....\....\tasks\PredictWidgetTask.class
...\....\....\.....\PredictWidgetTaskManager$MonitoringThread.class
...\....\....\.....\PredictWidgetTaskManager$TaskManagerThread.class
...\....\....\.....\PredictWidgetTaskManager$TaskMonitorPopupTask.class
...\....\....\.....\PredictWidgetTaskManager.class
...\....\....\.....\ReadAlphasTask.class
...\....\....\.....\ReadMeanNormsTask.class
...\....\....\.....\ReadStdNormsTask.class
...\....\....\.....\ReadSupportVectorsTask.class
...\....\....\.....\TaskCompletedListener.class
...\....\....\util\FileSystemModel$TreeFile.class
...\....\....\....\FileSystemModel.class
...\....\....\....\FileSystemTree$1.class
...\....\....\....\FileSystemTree$2.class
...\....\....\....\FileSystemTree.class