File list (Check if you may need any files):
satools\COPYRIGHT.txt
.......\m
.......\.\anneal.m
.......\.\berkeley.m
.......\.\COPYRIGHT.txt
.......\.\dispEh.m
.......\.\dispEt.m
.......\.\dispMat.m
.......\.\ensembleInit.m
.......\.\examples
.......\.\........\chemcluster
.......\.\........\...........\cluster_cost.m
.......\.\........\...........\cluster_init.m
.......\.\........\...........\cluster_new.m
.......\.\........\...........\cluster_perturb.m
.......\.\........\...........\clusterdistances.m
.......\.\........\...........\clusterplot.m
.......\.\........\...........\test_all.m
.......\.\........\...........\try_me.m
.......\.\........\graphbipart
.......\.\........\...........\bipart_cost.m
.......\.\........\...........\bipart_init.m
.......\.\........\...........\bipart_new.m
.......\.\........\...........\bipart_perturb.m
.......\.\........\...........\try_me.m
.......\.\........\proteinfold
.......\.\........\...........\sequence_cost.m
.......\.\........\...........\sequence_init.m
.......\.\........\...........\sequence_new.m
.......\.\........\...........\sequence_perturb.m
.......\.\........\...........\try_me.m
.......\.\........\README.txt
.......\.\........\seismicdecon
.......\.\........\............\decon_cost.m
.......\.\........\............\decon_init.m
.......\.\........\............\decon_new.m
.......\.\........\............\decon_perturb.m
.......\.\........\............\eventparts.m
.......\.\........\............\eventplot.m
.......\.\........\............\modelparts.m
.......\.\........\............\modelplot.m
.......\.\........\............\modelsignal.m
.......\.\........\............\README.txt
.......\.\........\............\try_me.m
.......\.\........\spinglass
.......\.\........\.........\Jcoord.m
.......\.\........\.........\spin_cost.m
.......\.\........\.........\spin_init.m
.......\.\........\.........\spin_new.m
.......\.\........\.........\spin_perturb.m
.......\.\........\.........\try_me.m
.......\.\........\tsp
.......\.\........\...\route_cost.m
.......\.\........\...\route_init.m
.......\.\........\...\route_new.m
.......\.\........\...\route_perturb.m
.......\.\........\...\try_me.m
.......\.\franz.m
.......\.\geman.m
.......\.\geometric.m
.......\.\hartley.m
.......\.\historyupdate.m
.......\.\hoffmann.m
.......\.\metropolis.m
.......\.\metropoliswalk.m
.......\.\mktemplate.m
.......\.\nextstate.m
.......\.\plotBins.m
.......\.\randomwalk.m
.......\.\README.txt
.......\.\retrospect.m
.......\.\satools.m
.......\.\satoolsversion.m
.......\.\stillinger3Dpoints.m
.......\.\szu.m
.......\.\template_cost.txt
.......\.\template_init.txt
.......\.\template_new.txt
.......\.\template_perturb.txt
.......\.\template_try_me.txt
.......\.\TfinalNstop.m
.......\.\thermospeedHC.m
.......\.\thermospeedR.m
.......\.\threshold.m
.......\.\TinitAccept.m
.......\.\TinitT0.m
.......\.\TinitWhite.m
.......\.\TM.m
.......\.\tsallis.m
.......\satools.pdf