allegro
.......\allegro-1.2c2
.......\.............\allegro-1.2c2.tar
.......\.............\bin
.......\.............\...\allegro-1.2c.dos.exe
.......\.............\...\allegro-1.2c.linux
.......\.............\...\allegro-1.2c.mac
.......\.............\...\allegro-1.2c.sun
.......\.............\BUGFIXES
.......\.............\DISTRIBUTION_NOTES
.......\.............\doc
.......\.............\...\fig3.pdf
.......\.............\...\fig3.ps
.......\.............\...\fig4.pdf
.......\.............\...\fig4.ps
.......\.............\...\manual.pdf
.......\.............\...\manual.ps
.......\.............\...\README
.......\.............\...\tables.pdf
.......\.............\...\tables.ps
.......\.............\...\tech.pdf
.......\.............\...\tech.ps
.......\.............\INSTALL
.......\.............\license.ps
.......\.............\Makefile
.......\.............\README
.......\.............\src
.......\.............\...\aclocal.m4
.......\.............\...\allegro.cc
.......\.............\...\allhaplomodel.h
.......\.............\...\asmexp.cc
.......\.............\...\asmexp.h
.......\.............\...\asmmodel.cc
.......\.............\...\asmmodel.h
.......\.............\...\asmpoly.cc
.......\.............\...\asmpoly.h
.......\.............\...\assocdist.cc
.......\.............\...\assocdist.h
.......\.............\...\assocmodel.cc
.......\.............\...\assocmodel.h
.......\.............\...\basic.cc
.......\.............\...\basic.h
.......\.............\...\bfgs.cc
.......\.............\...\bfgs.h
.......\.............\...\calc.cc
.......\.............\...\calc.h
.......\.............\...\calcassoc.cc
.......\.............\...\calcassoc.h
.......\.............\...\calclinkage.h
.......\.............\...\calcmarker.cc
.......\.............\...\calcmarker.h
.......\.............\...\calcparametric.cc
.......\.............\...\calcparametric.h
.......\.............\...\calcqtl.cc
.......\.............\...\calcqtl.h
.......\.............\...\calcscore.cc
.......\.............\...\calcscore.h
.......\.............\...\calcviterbi.cc
.......\.............\...\calcviterbi.h
.......\.............\...\condlikmodel.cc
.......\.............\...\condlikmodel.h
.......\.............\...\config.in
.......\.............\...\configure
.......\.............\...\configure.in
.......\.............\...\control.cc
.......\.............\...\control.h
.......\.............\...\convolve.cc
.......\.............\...\convolve.h
.......\.............\...\distribution.cc
.......\.............\...\distribution.h
.......\.............\...\entropy.cc
.......\.............\...\entropy.h
.......\.............\...\ExtData.cc
.......\.............\...\ExtData.hh
.......\.............\...\ExtFamily.cc
.......\.............\...\ExtFamily.hh
.......\.............\...\family.cc
.......\.............\...\family.h
.......\.............\...\files.cc
.......\.............\...\files.h
.......\.............\...\findassoc.cc
.......\.............\...\findassoc.h
.......\.............\...\findibd.cc
.......\.............\...\findibd.h
.......\.............\...\findlr.cc
.......\.............\...\findnormal.cc
.......\.............\...\findnormal.h
.......\.............\...\findscore.cc
.......\.............\...\findscore.h
.......\.............\...\fishersexact.cc
.......\.............\...\fishersexact.h
.......\.............\...\fmtout.cc
.......\.............\...\fmtout.h
.......\.............\...\forceddist.cc
.......\.............\...\forceddist.h
.......\.............\...\forcedmodel.cc
.......\.............\...\forcedmodel.h
.......\.............\...\founderhaplodist.cc
.......\.............\...\founderhaplodist.h
.......\.............\...\founderhaplomodel.h