autodock-4.0.1\aclocal.m4
..............\AD4_parameters.dat
..............\AD4_PARM99.dat
..............\analysis.cc
..............\analysis.h
..............\atom_parameter_manager.cc
..............\atom_parameter_manager.h
..............\AUTHORS
..............\autocomm.h
..............\autoglobal.h
..............\banner.cc
..............\banner.h
..............\bestpdb.cc
..............\bestpdb.h
..............\calculateEnergies.cc
..............\calculateEnergies.h
..............\call_glss.cc
..............\call_glss.h
..............\call_gs.cc
..............\call_gs.h
..............\call_ls.cc
..............\call_ls.h
..............\ChangeLog
..............\changeState.cc
..............\changeState.h
..............\check_header_float.cc
..............\check_header_float.h
..............\check_header_int.cc
..............\check_header_int.h
..............\check_header_line.cc
..............\check_header_line.h
..............\clmode.cc
..............\clmode.h
..............\cluster_analysis.cc
..............\cluster_analysis.h
..............\cmdmode.cc
..............\cmdmode.h
..............\cmdtokens.h
..............\cnv_state_to_coords.cc
..............\cnv_state_to_coords.h
..............\coliny.cc
..............\coliny.h
..............\com.cc
..............\config.guess
..............\config.sub
..............\configure
..............\configure.ac
..............\conformation_sampler.cc
..............\conformation_sampler.h
..............\constants.h
..............\COPYING
..............\default_parameters.h
..............\depcomp
..............\distdepdiel.cc
..............\distdepdiel.h
..............\dpftoken.h
..............\eintcal.cc
..............\eintcal.h
..............\eintcalPrint.cc
..............\eintcalPrint.h
..............\energy.h
..............\eval.cc
..............\eval.h
..............\gencau.cc
..............\gencau.h
..............\getInitialState.cc
..............\getInitialState.h
..............\getpdbcrds.cc
..............\getpdbcrds.h
..............\getrms.cc
..............\getrms.h
..............\get_atom_type.cc
..............\get_atom_type.h
..............\globals.h
..............\grid.h
..............\gs.cc
..............\gs.h
..............\hybrids.h
..............\initautodock.cc
..............\initautodock.h
..............\input_state.cc
..............\input_state.h
..............\INSTALL
..............\install-sh
..............\intnbtable.cc
..............\intnbtable.h
..............\investigate.cc
..............\investigate.h
..............\linpack.cc
..............\ls.cc
..............\ls.h
..............\main.cc
..............\main.h
..............\Makefile.am
..............\Makefile.in
..............\mapping.cc
..............\mdist.h
..............\minmeanmax.cc
..............\missing
..............\mkNewState.cc