MC2v2.0beta2
............\gillespie0.11-modified
............\......................\README.txt
............\......................\src
............\......................\...\ChangeLog
............\......................\...\dbInput.c
............\......................\...\dbInput.h
............\......................\...\gillespie2.c
............\......................\...\gillespie2.i
............\......................\...\Makefile
............\......................\...\meparse.c
............\......................\...\meparse.h
............\......................\...\simulate.c
............\......................\...\simulate.h
............\......................\...\swigBindings.c
............\......................\...\swigBindings.h
............\......................\test
............\......................\....\hsp90smallmodel2.xml
............\......................\....\LV.xml
............\......................\....\LV2.xml
............\......................\....\python
............\......................\....\......\simulate.py
............\......................\....\testEvents.xml
............\......................\....\testrules.xml
............\gillespie2-levchenko_4.run
............\gillespie2-tworeactionmodel_10.run
............\MC2.run
............\MC2v2.0beta2.jar
............\models
............\......\kholodenko.xml
............\......\levchenko.xml
............\......\levchenko_4.xml
............\......\levchenko_40.xml
............\......\levchenko_400.xml
............\......\levchenko_4000.xml
............\......\levchenko_8.xml
............\......\tworeactionmodel.xml
............\......\tworeactionmodel_10.xml
............\......\tworeactionmodel_100.xml
............\......\tworeactionmodel_1000.xml
............\......\tworeactionmodel_10000.xml
............\queries
............\.......\.DS_Store
__MACOSX
........\MC2v2.0beta2
........\............\queries
........\............\.......\._.DS_Store
MC2v2.0beta2\queries\C.queries
............\.......\oscillation.queries
............\.......\produceS1
............\.......\S1_4.queries
............\.......\S2.queries
__MACOSX\MC2v2.0beta2\queries\._S2.queries
MC2v2.0beta2\queries\tworeactionmodel.queries
__MACOSX\MC2v2.0beta2\queries\._tworeactionmodel.queries
MC2v2.0beta2\simulation_outputs
............\..................\.DS_Store
__MACOSX\MC2v2.0beta2\simulation_outputs
........\............\..................\._.DS_Store
MC2v2.0beta2\simulation_outputs\kholodenko_paramscan_Ki=1-30
............\..................\levchenko_4_output
............\..................\levchenko_bionessie
............\..................\tworeactionmodel_10_output