File list (Check if you may need any files):
SAE\checkNumericalGradient.m
...\computeNumericalGradient.m
...\display_network.m
...\IMAGES.mat
...\initializeParameters.m
...\minFunc\ArmijoBacktrack.m
...\.......\autoGrad.m
...\.......\autoHess.m
...\.......\autoHv.m
...\.......\autoTensor.m
...\.......\callOutput.m
...\.......\conjGrad.m
...\.......\dampedUpdate.m
...\.......\example_minFunc.m
...\.......\example_minFunc_LR.m
...\.......\isLegal.m
...\.......\lbfgs.m
...\.......\lbfgsC.c
...\.......\lbfgsC.mexa64
...\.......\lbfgsC.mexglx
...\.......\lbfgsC.mexmac
...\.......\lbfgsC.mexmaci
...\.......\lbfgsC.mexmaci64
...\.......\lbfgsC.mexw32
...\.......\lbfgsC.mexw64
...\.......\lbfgsUpdate.m
...\.......\.ogistic\LogisticDiagPrecond.m
...\.......\........\LogisticHv.m
...\.......\........\LogisticLoss.m
...\.......\........\mexutil.c
...\.......\........\mexutil.h
...\.......\........\mylogsumexp.m
...\.......\........\repmatC.c
...\.......\........\repmatC.dll
...\.......\........\repmatC.mexglx
...\.......\........\repmatC.mexmac
...\.......\mchol.m
...\.......\mcholC.c
...\.......\mcholC.mexmaci64
...\.......\mcholC.mexw32
...\.......\mcholC.mexw64
...\.......\mcholinc.m
...\.......\minFunc.m
...\.......\minFunc_processInputOptions.m
...\.......\polyinterp.m
...\.......\precondDiag.m
...\.......\precondTriu.m
...\.......\precondTriuDiag.m
...\.......\rosenbrock.m
...\.......\taylorModel.m
...\.......\WolfeLineSearch.m
...\sampleIMAGES.m
...\sparseAutoencoderCost.m
...\train.m
...\weights.jpg
...\minFunc\logistic
...\minFunc
SAE