PennCNV-1.0.3
.............\.gitignore
.............\README.md
.............\UNLICENSE
.............\cal_gc_snp.pl
.............\clean_cnv.pl
.............\compare_cnv.pl
.............\compile_pfb.pl
.............\convert_cnv.pl
.............\detect_cnv.pl
.............\docs
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.............\....\...\PennCNV_76neu_3unique_chr18.png
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.............\....\...\suptable2.jpg
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.............\....\index.md
.............\....\misc
.............\....\....\contributing.md
.............\....\....\credit.md
.............\....\....\faq.md
.............\....\....\version_history.md
.............\....\user-guide
.............\....\..........\affy.md
.............\....\..........\annotation.md
.............\....\..........\denovo.md
.............\....\..........\download.md
.............\....\..........\input.md
.............\....\..........\install.md
.............\....\..........\joint.md
.............\....\..........\plugin.md
.............\....\..........\startup.md
.............\....\..........\test.md
.............\....\..........\trio.md
.............\....\..........\validation.md
.............\....\..........\visualization.md
.............\example
.............\.......\.RData
.............\.......\README
.............\.......\ccnvr
.............\.......\ex1.log
.............\.......\ex1.rawcnv
.............\.......\example.canary_calls
.............\.......\example.hmm
.............\.......\example.pfb
.............\.......\father.txt
.............\.......\inputlist
.............\.......\mother.txt
.............\.......\offspring.txt
.............\.......\output_expected
.............\.......\...............\ex1.bed
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.............\.......\...............\ex1.rawcnv
.............\.......\...............\ex1.tabcnv
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