demon-2\basic_demon_example.m
.......\compile_c_files.m
.......\demon3d_example.asv
.......\demon3d_example.m
.......\functions\backwards2forwards.m
.......\.........\backwards2forwards_2d_double.c
.......\.........\backwards2forwards_2d_double.m
.......\.........\backwards2forwards_2d_double.mexw32
.......\.........\backwards2forwards_3d_double.c
.......\.........\backwards2forwards_3d_double.mexw32
.......\.........\backwards2forwards_3d_single.c
.......\.........\backwards2forwards_3d_single.mexw32
.......\.........\demons_energy.m
.......\.........\fminlbfgs.asv
.......\.........\fminlbfgs.m
.......\.........\imgaussian.m
.......\.........\imresize3d.m
.......\.........\MutualTransform.m
.......\.........\mutual_histogram_double.c
.......\.........\mutual_histogram_double.m
.......\.........\mutual_histogram_double.mexw32
.......\.........\mutual_histogram_single.c
.......\.........\mutual_histogram_single.mexw32
.......\.........\mutual_transform_2d_double.asv
.......\.........\mutual_transform_2d_double.c
.......\.........\mutual_transform_2d_double.m
.......\.........\mutual_transform_2d_double.mexw32
.......\.........\mutual_transform_3d_double.asv
.......\.........\mutual_transform_3d_double.c
.......\.........\mutual_transform_3d_double.mexw32
.......\.........\mutual_transform_3d_single.asv
.......\.........\mutual_transform_3d_single.c
.......\.........\mutual_transform_3d_single.mexw32
.......\.........\showcs3.fig
.......\.........\showcs3.m
.......\.........\store_transf.m
.......\.........\strain.m
.......\........._affine\affine_error_3d_double.c
.......\................\affine_error_3d_double.mexw32
.......\................\affine_error_3d_single.c
.......\................\affine_error_3d_single.mexw32
.......\................\affine_registration_error.m
.......\................\affine_registration_image.m
.......\................\affine_transform.m
.......\................\affine_transform_2d_double.c
.......\................\affine_transform_2d_double.m
.......\................\affine_transform_2d_double.mexw32
.......\................\affine_transform_3d_double.c
.......\................\affine_transform_3d_double.mexw32
.......\................\affine_transform_3d_single.c
.......\................\affine_transform_3d_single.mexw32
.......\................\image_difference.m
.......\................\image_interpolation.c
.......\................\image_interpolation.h
.......\................\make_transformation_matrix.m
.......\................\squared_difference_double.c
.......\................\squared_difference_double.m
.......\................\squared_difference_double.mexw32
.......\................\squared_difference_single.c
.......\................\squared_difference_single.mexw32
.......\..........nonrigid\image_interpolation.c
.......\..................\image_interpolation.h
.......\..................\movepixels.m
.......\..................\movepixels_2d_double.c
.......\..................\movepixels_2d_double.m
.......\..................\movepixels_2d_double.mexw32
.......\..................\movepixels_2d_double.mexw32.map
.......\..................\movepixels_3d_double.c
.......\..................\movepixels_3d_double.mexw32
.......\..................\movepixels_3d_single.c
.......\..................\movepixels_3d_single.mexw32
.......\images\brain_FA.png
.......\......\brain_FLAIR.png
.......\......\brain_MD.png
.......\......\brain_T1.png
.......\......\brain_T1_wave.png
.......\......\brain_T2.png
.......\......\brain_T2_wave.png
.......\......\checkboard2.png
.......\......\checkboard3.png
.......\......\checkboard4.png
.......\......\get_example_data.m
.......\......\lenag1.png
.......\......\lenag2.png
.......\......\lenag3.png
.......\......\modtest1.png
.......\......\modtest2.png
.......\......\modtest3.png
.......\......\wave_field.mat
.......\license.txt
.......\..terature\Kroon_Paper_Boston.pdf
.......\..........\Kroon_Poster_Boston.pdf
.......\register_images.m
.......\register_volumes.m
.......\functions
.......\functions_affine
.......\functions_nonrigid
.......\images