Description: rHAT: fast alignment of noisy long reads with regional hashing. This is the thesis of this post C++ implemented algorithm source code.- On a long read bioinformatics matching art based on the hash algorithm to solve. Runs on linux, comes with parallel processing parameters.
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rHAT-master
...........\LICENSE
...........\README.html
...........\README.md
...........\src
...........\...\Makefile
...........\...\aligner.cpp
...........\...\aligner.h
...........\...\desc.h
...........\...\form.cpp
...........\...\form.h
...........\...\formh.cpp
...........\...\formh.h
...........\...\genhash.cpp
...........\...\graph.cpp
...........\...\graph.h
...........\...\hash.cpp
...........\...\hash.h
...........\...\kseq.h
...........\...\ksw.c
...........\...\ksw.h
...........\...\main.cpp
...........\...\readfl.cpp
...........\...\readfl.h
...........\...\tags
...........\...\whash.cpp
...........\...\whash.h
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