Description: This program implements Nussinov algorithm on predicting RNA structure from RNA sequence using dynamic programming approach. The baisic idea is similiar with Smith-Waterman algorithm, obtaining optimal result about predicting RNA secondary structure. This program is able to deal with "bulge","hairpin loop" efficiently but can not handle "pseudoknot .
File list (Check if you may need any files):
RNA seq.txt
NussinovRNA.py
NussinovRNA.readme
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