File list (Check if you may need any files):
pipe25_rc5
..........\pipe.bat
..........\pipe.sh
..........\src
..........\...\src.zip
..........\lib
..........\...\jpowergraph-0.2-common.jar
..........\...\powerswing-0.3.jar
..........\...\jpowergraph-0.2-swing.jar
..........\cfg
..........\...\GSPNNew.properties
..........\...\classification.properties
..........\...\stateSpace.properties
..........\...\invariantAnalysis.properties
..........\...\comparison_1.properties
..........\...\dnamaca.properties
..........\...\simulation.properties
..........\...\TrapSiphons.properties
..........\...\comparison.properties
..........\...\matrixes.properties
..........\Docs
..........\....\PIPE images
..........\....\...........\51GSPNNET.png
..........\....\...........\14.select components.png
..........\....\...........\45DNAmeca.png
..........\....\...........\39incidence and marking.png
..........\....\...........\19.step forward a firing.png
..........\....\...........\3.save.png
..........\....\...........\20.randomply fire a number of transitions.png
..........\....\...........\7.add a place.png
..........\....\...........\36InnvariantCIRCUIT.png
..........\....\...........\16.toggle to an mode.png
..........\....\...........\2.open.png
..........\....\...........\50gspn.png
..........\....\...........\4.Save as.png
..........\....\...........\15change the grid size.png
..........\....\...........\12.ad a token.png
..........\....\...........\10.add an arc.png
..........\....\...........\5.close.png
..........\....\...........\6.print.png
..........\....\...........\17.Step backward a firing.png
..........\....\...........\9.add a timed transition.png
..........\....\...........\44general stohastic.png
..........\....\...........\Thumbs.db
..........\....\...........\47StateSpace.png
..........\....\...........\37simulation.png
..........\....\...........\22.PIPE.png
..........\....\...........\46Comparison.png
..........\....\...........\8.add a transition.png
..........\....\...........\42classificationNET.png
..........\....\...........\20.randomly fire a transition.png
..........\....\...........\40incidence and markingNET.png
..........\....\...........\35Innvariant.png
..........\....\...........\1.new.png
..........\....\...........\23.top left GUI.png
..........\....\...........\49Comparison RES.png
..........\....\...........\13.delete a token.png
..........\....\...........\41classification.png
..........\....\...........\38simulationNET.png
..........\....\...........\21.PIPE help.png
..........\....\...........\11.add an annotation.png
..........\....\19.toggle to animation mode.htm
..........\....\15.add a token.htm
..........\....\21.step forward firing.htm
..........\....\2.Simulation.htm
..........\....\4.Classification.htm
..........\....\0.Analysis Modules.htm
..........\....\17.select components.htm
..........\....\20.step backward a firing.htm
..........\....\31.add_a_timed_transition.htm
..........\....\index.htm
..........\....\36general_stochastic_petri.htm
..........\....\14.add an arc.htm
..........\....\1.Invariant Analysis.htm
..........\....\using the taskbar.htm
..........\....\12.add a place.htm
..........\....\28.Add Token Mode.htm
..........\....\34.print.htm
..........\....\37dnamacamodule.htm
..........\....\23.drawing modes.htm
..........\....\18.change grid size.htm
..........\....\38timed_transition_mode.htm
..........\....\10.save a file as.htm
..........\....\3.State Space.htm
..........\....\32.add_an_annotation.htm
..........\....\8.open an already existing file.htm
..........\....\29.Delete Token Mode.htm
..........\....\7.create a new petri-net.htm
..........\....\26.Arc Mode.htm
..........\....\22.randomly fire a transition.htm
..........\....\16.delete a token.htm
..........\....\33.randomly_fire_a_number_of_transi.htm
..........\....\25.Transition Mode.htm
..........\....\13.add a transition.htm
..........\....\27.Select Mode.htm
..........\....\9.save an existing file.htm
..........\....\24.Place Mode.htm
..........\....\11.close current tub.htm
..........\....\6.Incidence and Marking.htm
..........\....\39toggle_mode.htm