agamemnon-master
agamemnon-master\.gitignore
agamemnon-master\Aug_19_2016
agamemnon-master\Aug_19_2016\metadata.txt
agamemnon-master\Aug_28_2016
agamemnon-master\Aug_28_2016\metadata.txt
agamemnon-master\README.md
agamemnon-master\compute_product.m
agamemnon-master\convert_from_ode_format.m
agamemnon-master\convert_to_ode_format.m
agamemnon-master\diff_f.m
agamemnon-master\documentation
agamemnon-master\documentation\README.md
agamemnon-master\documentation\initial_data_format.txt
agamemnon-master\documentation\journal.txt
agamemnon-master\documentation\run_file_format.txt
agamemnon-master\documentation\step_function_format.txt
agamemnon-master\evolve_for_one_time_interval.m
agamemnon-master\fill_fourier_spectrum.m
agamemnon-master\fourier_linspace.m
agamemnon-master\full_fourier_spectrum.m
agamemnon-master\guis
agamemnon-master\guis\initiate_plot_tool.m
agamemnon-master\guis\plot_conserved_quantities.fig
agamemnon-master\guis\plot_conserved_quantities.m
agamemnon-master\guis\plot_conserved_quantity.m
agamemnon-master\guis\plot_fourier_spectrum.m
agamemnon-master\guis\plot_solution.m
agamemnon-master\hardcopy.1
agamemnon-master\hilbert_transform.m
agamemnon-master\normalize_spectrum.m
agamemnon-master\old_plot.m
agamemnon-master\pdf_parse_initial_data
agamemnon-master\pdf_parse_initial_data\CreateBlankPDF.java
agamemnon-master\pdf_parse_initial_data\CustomGraphicsStreamEngine.java
agamemnon-master\pdf_parse_initial_data\CustomPDFReader.java
agamemnon-master\pdf_parse_initial_data\PDFReader.java
agamemnon-master\pdf_parse_initial_data\PDFReaderOperation.java
agamemnon-master\pdf_parse_initial_data\PdfDrawer.m
agamemnon-master\pdf_parse_initial_data\org
agamemnon-master\pdf_parse_initial_data\org\sam
agamemnon-master\pdf_parse_initial_data\org\sam\is
agamemnon-master\pdf_parse_initial_data\org\sam\is\awesome
agamemnon-master\pdf_parse_initial_data\org\sam\is\awesome\Test.java
agamemnon-master\plot_fourier_modes.m
agamemnon-master\plot_slider_of_system.m
agamemnon-master\plot_tool_for_finding_conserved.m
agamemnon-master\plotting_for_paper
agamemnon-master\plotting_for_paper\construct_initial_data_for_gallery.m
agamemnon-master\reconstruct_signal.m
agamemnon-master\run_main_experiment.m
agamemnon-master\scripts
agamemnon-master\scripts\kill_all.sh
agamemnon-master\scripts\push_code.sh
agamemnon-master\scripts\run_all_experiments.sh
agamemnon-master\step_solution_degregorio.m
agamemnon-master\step_solution_quasilinear.m
agamemnon-master\tests
agamemnon-master\tests\check_harmonic_oscillator.m
agamemnon-master\tests\compute_product_test.m
agamemnon-master\tests\convert_between_ode_format_test.m
agamemnon-master\tests\diff_f_test.m
agamemnon-master\tests\fill_fourier_spectrum_test.m
agamemnon-master\tests\fourier_bench_test.m
agamemnon-master\tests\fourier_linspace_test.m
agamemnon-master\tests\full_fourier_spectrum_test.m
agamemnon-master\tests\hilbert_transform_test.m
agamemnon-master\tests\normalize_spectrum_test.m
agamemnon-master\tests\reconstruct_signal_test.m
agamemnon-master\tests\step_solution_degregorio_test.m
agamemnon-master\tests\step_solution_quasilinear_test.m
agamemnon-master\tests\test_bezier_curves.m
agamemnon-master\tests\test_function_call.m