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Description: 一个用于蛋白质序列分类的profile hmm的Perl代码-One for protein sequence classification of the Perl code profile hmm
Platform: |
Size: 3072 |
Author: lyreau |
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Description: Profile hidden Markov models (profile HMMs) can be used to do sensitive database searching using statistical descriptions of a sequence family s consensus. HMMER is a freely distributable implementation of profile HMM software for protein sequence analysis.-Profile hidden Markov models (profile HMMs) can be used to do sensitive database searching using statistical descriptions of a sequence family' s consensus. HMMER is a freely distributable implementation of profile HMM software for protein sequence analysis.
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Size: 1025024 |
Author: nonobo |
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Description: UGENE is a free cross-platform genome analysis suite.
Main features:
Multiple sequence alignment using MUSCLE 3,4 and KAlign
HMM profiles build and search, based on the source of HMMER 2 and HMMER 3
PCR Primers design using Primer 3
Protein secondary structure prediction using GOR IV and PSIPRED
Phylogenetic analysis with Phylip
Search for restriction enzymes and integration with REBASE
Extremely fast repeat finder
DNA reference assembly using Bowtie
Search for transcription factor binding sites using SITECON
Protein back translation
ORF finder
Complete Smith-Waterman algorithm implementation
Comparing genomes using dotplot view.
-UGENE is a free cross-platform genome analysis suite.
Main features:
Multiple sequence alignment using MUSCLE 3,4 and KAlign
HMM profiles build and search, based on the source of HMMER 2 and HMMER 3
PCR Primers design using Primer 3
Protein secondary structure prediction using GOR IV and PSIPRED
Phylogenetic analysis with Phylip
Search for restriction enzymes and integration with REBASE
Extremely fast repeat finder
DNA reference assembly using Bowtie
Search for transcription factor binding sites using SITECON
Protein back translation
ORF finder
Complete Smith-Waterman algorithm implementation
Comparing genomes using dotplot view.
Platform: |
Size: 12673024 |
Author: baaaa |
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Description: HMM是隐马氏模型，预测蛋白质的二级结构，当你输入一段未知的需要测定的蛋白质序列时，利用已经训练好的蛋白质，可以预测蛋白质的二级结构
-HMM is a hidden Markov model, the predicted secondary structure of the protein, when you enter a need to determine the unknown protein sequence, the use of has trained proteins, the prediction of protein secondary structure
Platform: |
Size: 12288 |
Author: 潘琳 |
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Description: 3D-HMM用于蛋白质结构预测的源代码，可实现三维空间的蛋白质结构预测-the source code of 3D-HMM for protein structure prediction, can achieve three-dimensional protein structure prediction
Platform: |
Size: 505856 |
Author: Sun Sui |
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Description: 蛋白质识别HMM算法的C语言实现，里面有详细的注释和说明，阅读起来很容易理清程序流程和思路，函数的功能以及函数怎么调用都说的很清楚。内附SAMPLE-A CLASSFICATION OF HMM WITH PROTEIN
Platform: |
Size: 8192 |
Author: dql |
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