Description: 用于蛋白质数据生成分类数据的转换。做PSS（Protein Secondary Structure prediction)的可以参考一下。
-for protein production data disaggregated data conversion. Do PSS (Protein Secondary Structure prediction ) can be examined. Platform: |
Size: 7748 |
Author:罗迪君 |
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Description: ViennaRNA-1.6.1，用于预测RNA二级结构的软件，运行在UNIX或Linux平台下-ViennaRNA - 1.6.1 for RNA secondary structure prediction software. run on UNIX or Linux platforms Platform: |
Size: 1253083 |
Author:朱伟 |
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Description: psipred2.4，用于预测蛋白质二级结构的软件，运行在UNIX或Linux平台下-psipred2.4 for protein secondary structure prediction software, run on UNIX or Linux platforms Platform: |
Size: 32567 |
Author:朱伟 |
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Description: 用于蛋白质数据生成分类数据的转换。做PSS（Protein Secondary Structure prediction)的可以参考一下。
-for protein production data disaggregated data conversion. Do PSS (Protein Secondary Structure prediction ) can be examined. Platform: |
Size: 7168 |
Author:罗迪君 |
Hits:
Description: ViennaRNA-1.6.1，用于预测RNA二级结构的软件，运行在UNIX或Linux平台下-ViennaRNA- 1.6.1 for RNA secondary structure prediction software. run on UNIX or Linux platforms Platform: |
Size: 1252352 |
Author:朱伟 |
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Description: psipred2.4，用于预测蛋白质二级结构的软件，运行在UNIX或Linux平台下-psipred2.4 for protein secondary structure prediction software, run on UNIX or Linux platforms Platform: |
Size: 32768 |
Author:朱伟 |
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Description: RNA二级结构预测程序，来自vienna大学-RNA secondary structure prediction program, from the University of vienna Platform: |
Size: 1249280 |
Author:徐琳 |
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Description: UGENE is a free cross-platform genome analysis suite.
Main features:
Multiple sequence alignment using MUSCLE 3,4 and KAlign
HMM profiles build and search, based on the source of HMMER 2 and HMMER 3
PCR Primers design using Primer 3
Protein secondary structure prediction using GOR IV and PSIPRED
Phylogenetic analysis with Phylip
Search for restriction enzymes and integration with REBASE
Extremely fast repeat finder
DNA reference assembly using Bowtie
Search for transcription factor binding sites using SITECON
Protein back translation
ORF finder
Complete Smith-Waterman algorithm implementation
Comparing genomes using dotplot view.
-UGENE is a free cross-platform genome analysis suite.
Main features:
Multiple sequence alignment using MUSCLE 3,4 and KAlign
HMM profiles build and search, based on the source of HMMER 2 and HMMER 3
PCR Primers design using Primer 3
Protein secondary structure prediction using GOR IV and PSIPRED
Phylogenetic analysis with Phylip
Search for restriction enzymes and integration with REBASE
Extremely fast repeat finder
DNA reference assembly using Bowtie
Search for transcription factor binding sites using SITECON
Protein back translation
ORF finder
Complete Smith-Waterman algorithm implementation
Comparing genomes using dotplot view.
Platform: |
Size: 12673024 |
Author:baaaa |
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Description: HMM是隐马氏模型，预测蛋白质的二级结构，当你输入一段未知的需要测定的蛋白质序列时，利用已经训练好的蛋白质，可以预测蛋白质的二级结构
-HMM is a hidden Markov model, the predicted secondary structure of the protein, when you enter a need to determine the unknown protein sequence, the use of has trained proteins, the prediction of protein secondary structure Platform: |
Size: 12288 |
Author:潘琳 |
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Description: 这是一个RNA二级结构预测的程序，采用C实现，供大家分享-This is an RNA secondary structure prediction program, using C to achieve, for all to share Platform: |
Size: 8192 |
Author:郑蓉 |
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Description: psipred2.4，用于预测蛋白质二级结构的软件，运行在UNIX或Linux平台下-psipred2.4, for protein secondary structure prediction software, running under UNIX or Linux platforms Platform: |
Size: 32768 |
Author:钱小小 |
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Description: 是蛋白质二级结构优化（基于2维度非晶格模型）的优化代码，可直接运行，算法书写简单，高中生都能看懂。唯独一点，必须引用我们的两篇论文，否则算侵犯版权。- description : A self-organized matlab m file for protein structure
optimization using 2D off-lattice model and ABC algorithm.
Users MUST cite the following two articles if the codes are implemented in their studies
(1) Li, B., Li, Y., & Gong, L. (2014). Protein secondary structure optimization using an improved artificial bee colony algorithm based on AB off-lattice model. Engineering Applications of Artificial Intelligence, 27, 70-79.
(2) Li, B., Gong, L., & Yao, Y. (2013, October). On the performance of internal feedback artificial bee colony algorithm (IF-ABC) for protein secondary structure prediction. In Advanced Computational Intelligence (ICACI), 2013 Sixth International Conference on (pp. 33-38). IEEE. Platform: |
Size: 2563072 |
Author:李白 |
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Search - secondary structure prediction