viterbi_path.m em_converged.m fwdback.m gen_HMM_em.m HMM_logprob.m init_diagonal.m init_grid.m init_random.m mendelHMM.fig mendelHMM.m mk_stochastic.m multinomial_prob.m normalise.m process_options.m readme.txt resample_mendeldata.m sample_discr.m sample_HMM.m sample_MC.m set_diploidmode.m set_tetraploidmode.m view_dataseq.m view_mendeldata.m view_sampleddata.m